IISc MBU

Computational Biology and Bioinformatics

Prof. Saraswathi Vishveshwara Laboratory

Molecular Biophysics Unit, IISc, Bangalore, India


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Ongoing & Past Projects

HGDC
Mechanism of cataract divation in humans explored through MD Simulation in WT & Mutated divs (P23T) of HGDC
Copyright ©2015 SV Lab, Contact SV Lab.
Protein
Weighted Interactions of Protein Structure Networks.
Red: High Degree of Interaction, Blue: Medium Degree of Interaction, Dotted: Low degree of Interaction
Copyright ©2015 SV Lab, Contact SV Lab.
dimer
Molecular Dynamic Simulation studies of Ribonuclease dimer (PDB:1AY7) in the native and decoy docked state.
Copyright ©2015 SV Lab, Contact SV Lab.
dimer
Copyright ©2015 SV Lab, Contact SV Lab.
dimer
Sukhwal A, Bhattacharyya M, Vishveshwara S. Network approach for capturing ligand-induced subtle global changes in protein structures Acta Cryst.D 67,429-439 (2011).
dimer
Williams SM, Chandran AV, Vijayabaskar MS, Roy S, Balaram H, Vishveshwara S, Vijayan M, Chatterji D. A histidine aspartate ionic lock gates the iron passage in miniferritins from Mycobacterium smegmatis. J Biol Chem. 289(16):11042-58.(2014)
dimer
Vijayabaskar MS, Vishveshwara S. Insights into the fold organization of TIM barrel from interaction energy based structure networks. PLoS Comput Biol. 8(5):e1002505. (2012)
dimer
Bhattacharyya M, Bhat CR, Vishveshwara S. An automated approach to network features of protein structure ensembles. Protein Sci. 22(10):1399-416. (2013)
dimer
Ghosh S, Chandra N, Vishveshwara S. Mechanism of Iron-Dependent Repressor (IdeR) Activation and DNA Binding: A Molecular Dynamics and Protein Structure Network Study.PLoS Comput Biol. 2015 Dec 23;11(12):e1004500.
dimer
Chatterjee S, Ghosh S, Vishveshwara S Network properties of decoys and CASP predicted models: a comparison with native protein structures. Mol Biosyst.; 9 (7):1774-88. (2013)


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